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Ten1 TEN1 subunit of CST complex [ Castor canadensis (American beaver) ]

Gene ID: 109683484, updated on 14-Mar-2024

Summary

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Gene symbol
Ten1
Gene description
TEN1 subunit of CST complex
See related
Ensembl:ENSCCNG00000014698
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Ten1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870125.1 (30989..47895)

NW_017870125.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA oxidase 1 Neighboring gene cyclin dependent kinase 3 Neighboring gene envoplakin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870125.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables telomerase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of telomere maintenance via telomerase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CST complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CST complex subunit TEN1
Names
TEN1, CST complex subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870125.1 Reference C.can genome v1.0

    Range
    30989..47895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020159348.1 → XP_020014937.1  CST complex subunit TEN1

    UniProtKB/TrEMBL
    A0A250Y9E3
    Conserved Domains (1) summary
    pfam15490
    Location:2 → 118
    Ten1_2; Telomere-capping, CST complex subunit

  2. XM_020159345.1 → XP_020014934.1  CST complex subunit TEN1

    UniProtKB/TrEMBL
    A0A250Y9E3
    Conserved Domains (1) summary
    pfam15490
    Location:2 → 118
    Ten1_2; Telomere-capping, CST complex subunit

  3. XM_020159346.1 → XP_020014935.1  CST complex subunit TEN1

    UniProtKB/TrEMBL
    A0A250Y9E3
    Conserved Domains (1) summary
    pfam15490
    Location:2 → 118
    Ten1_2; Telomere-capping, CST complex subunit

  4. XM_020159344.1 → XP_020014933.1  CST complex subunit TEN1

    UniProtKB/TrEMBL
    A0A250Y9E3
    Related
    ENSCCNP00000014187.1, ENSCCNT00000018612.1
    Conserved Domains (1) summary
    pfam15490
    Location:2 → 118
    Ten1_2; Telomere-capping, CST complex subunit

  5. XM_020159347.1 → XP_020014936.1  CST complex subunit TEN1

    UniProtKB/TrEMBL
    A0A250Y9E3
    Conserved Domains (1) summary
    pfam15490
    Location:2 → 118
    Ten1_2; Telomere-capping, CST complex subunit
Nucleotide Protein
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