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Bicd2 BICD cargo adaptor 2 [ Castor canadensis (American beaver) ]

Gene ID: 109682933, updated on 14-Mar-2024

Summary

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Gene symbol
Bicd2
Gene description
BICD cargo adaptor 2
See related
Ensembl:ENSCCNG00000009381
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Bicd2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870058.1 (58420..102622)

NW_017870058.1Genomic Context describing neighboring genes Neighboring gene FYVE, RhoGEF and PH domain-containing protein 3-like Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene inositol-pentakisphosphate 2-kinase Neighboring gene centromere protein P

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870058.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytoskeletal anchor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynactin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule anchoring at microtubule organizing center IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein bicaudal D homolog 2
Names
protein bicaudal D 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870058.1 Reference C.can genome v1.0

    Range
    58420..102622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020158524.1 → XP_020014113.1  LOW QUALITY PROTEIN: protein bicaudal D homolog 2

    UniProtKB/TrEMBL
    A0A8B7U2W0, A0A8C0WBI2
    Related
    ENSCCNP00000008886.1, ENSCCNT00000011706.1
    Conserved Domains (1) summary
    pfam09730
    Location:83 → 792
    BicD; Microtubule-associated protein Bicaudal-D
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials