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b3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109636549, updated on 30-Oct-2024

Summary

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Gene symbol
b3gnt7
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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See b3gnt7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_10 current ASM2471397v2 (GCF_024713975.1) 3 NC_091095.1 (9660794..9664255, complement)
100 previous assembly Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859671.1 (640704..644173)

Chromosome 3 - NC_091095.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA75 Neighboring gene small nucleolar RNA SNORA57 Neighboring gene nucleolin Neighboring gene lisH domain-containing protein ARMC9 Neighboring gene RNA polymerase II, I and III subunit H Neighboring gene major facilitator superfamily domain containing 8-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024713975.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2471397v2 Primary Assembly

Genomic

  1. NC_091095.1 Reference ASM2471397v2 Primary Assembly

    Range
    9660794..9664255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020098319.2 → XP_019953878.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 isoform X1

    Conserved Domains (1) summary
    cl21608
    Location:155 → 346
    Galactosyl_T; Galactosyltransferase

  2. XM_069521869.1 → XP_069377970.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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