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LOC109635980 laminin subunit alpha-2-like [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109635980, updated on 9-Nov-2023

Summary

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Gene symbol
LOC109635980
Gene description
laminin subunit alpha-2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
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Genomic context

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See LOC109635980 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859669.1 (1302984..1379076, complement)

NW_017859669.1Genomic Context describing neighboring genes Neighboring gene laminin subunit alpha-2-like Neighboring gene laminin subunit alpha-2-like Neighboring gene laminin subunit alpha-2-like Neighboring gene vesicular inhibitory amino acid transporter-like Neighboring gene protein tyrosine phosphatase receptor type K

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859669.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859669.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    1302984..1379076 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020097470.1 → XP_019953029.1  laminin subunit alpha-2-like

    Conserved Domains (4) summary
    smart00136
    Location:19 → 271
    LamNT; Laminin N-terminal domain (domain VI)
    cd00055
    Location:399 → 451
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:455 → 501
    Laminin_EGF; Laminin EGF domain
    pfam00052
    Location:566 → 682
    Laminin_B; Laminin B (Domain IV)
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases