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hs3st4 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109634154, updated on 29-Oct-2024

Summary

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Gene symbol
hs3st4
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
zebrafish all
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Genomic context

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See hs3st4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_10 current ASM2471397v2 (GCF_024713975.1) 5 NC_091097.1 (9865044..9936074, complement)
100 previous assembly Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859663.1 (6635174..6703706, complement)

Chromosome 5 - NC_091097.1Genomic Context describing neighboring genes Neighboring gene UNC93-like protein MFSD11 Neighboring gene lysine (K)-specific demethylase 8 Neighboring gene heparan sulfate (glucosamine) 3-O-sulfotransferase 2 Neighboring gene ubiquitin specific peptidase 31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024713975.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2471397v2 Primary Assembly

Genomic

  1. NC_091097.1 Reference ASM2471397v2 Primary Assembly

    Range
    9865044..9936074 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020094450.2 → XP_019950009.2  heparan sulfate glucosamine 3-O-sulfotransferase 4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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