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LOC109630365 carbohydrate sulfotransferase 15-like [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109630365, updated on 30-Oct-2024

Summary

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Gene symbol
LOC109630365
Gene description
carbohydrate sulfotransferase 15-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
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Genomic context

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See LOC109630365 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_10 current ASM2471397v2 (GCF_024713975.1) 14 NC_091106.1 (16909872..16926498)
100 previous assembly Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859642.1 (16110131..16126232)

Chromosome 14 - NC_091106.1Genomic Context describing neighboring genes Neighboring gene protein FAM53B-like Neighboring gene NK1 transcription factor related 2-like,a Neighboring gene G-protein coupled receptor 26-like Neighboring gene uncharacterized LOC138413663

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hexose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 15-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024713975.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2471397v2 Primary Assembly

Genomic

  1. NC_091106.1 Reference ASM2471397v2 Primary Assembly

    Range
    16909872..16926498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020088537.2 → XP_019944096.1  carbohydrate sulfotransferase 15-like

    Conserved Domains (1) summary
    cl21551
    Location:233 → 479
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
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