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galnt17 polypeptide N-acetylgalactosaminyltransferase 17 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109630139, updated on 5-Nov-2024

Summary

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Gene symbol
galnt17
Gene description
polypeptide N-acetylgalactosaminyltransferase 17
See related
EnsemblRapid:ENSPOLG00010025970
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
wbscr17
Orthologs
zebrafish all
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Genomic context

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See galnt17 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_10 current ASM2471397v2 (GCF_024713975.1) 11 NC_091103.1 (24200215..24217464, complement)
100 previous assembly Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859654.1 (1553712..1565669)

Chromosome 11 - NC_091103.1Genomic Context describing neighboring genes Neighboring gene tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) Neighboring gene calneuron 1 Neighboring gene rhomboid domain containing 1 Neighboring gene EMAP like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 17
Names
Williams-Beuren syndrome chromosome region 17
putative polypeptide N-acetylgalactosaminyltransferase-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024713975.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2471397v2 Primary Assembly

Genomic

  1. NC_091103.1 Reference ASM2471397v2 Primary Assembly

    Range
    24200215..24217464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_069534654.1 → XP_069390755.1  polypeptide N-acetylgalactosaminyltransferase 17

    Related
    ENSPOLP00010067465.1, ENSPOLT00010077479.1
Nucleotide Protein
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Gene LinkOut

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