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LOC109627347 galactosylceramide sulfotransferase-like [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109627347, updated on 5-Nov-2024

Summary

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Gene symbol
LOC109627347
Gene description
galactosylceramide sulfotransferase-like
See related
EnsemblRapid:ENSPOLG00010016763
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
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Genomic context

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See LOC109627347 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_10 current ASM2471397v2 (GCF_024713975.1) 8 NC_091100.1 (17126137..17133099, complement)
100 previous assembly Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859649.1 (10815918..10819050)

Chromosome 8 - NC_091100.1Genomic Context describing neighboring genes Neighboring gene zeta-sarcoglycan Neighboring gene uncharacterized LOC138411208 Neighboring gene phospholipid-transporting ATPase ABCA1 Neighboring gene serine peptidase inhibitor, Kazal type 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylceramide sulfotransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024713975.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2471397v2 Primary Assembly

Genomic

  1. NC_091100.1 Reference ASM2471397v2 Primary Assembly

    Range
    17126137..17133099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020083839.2 → XP_019939398.2  galactosylceramide sulfotransferase-like

    Related
    ENSPOLP00010045045.1, ENSPOLT00010049907.1
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases