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LOC109626316 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109626316, updated on 5-Nov-2024

Summary

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Gene symbol
LOC109626316
Gene description
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
See related
EnsemblRapid:ENSPOLG00010007897
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
zebrafish all
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Genomic context

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See LOC109626316 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_10 current ASM2471397v2 (GCF_024713975.1) 18 NC_091110.1 (15860612..15865272, complement)
100 previous assembly Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859647.1 (15872791..15875110, complement)

Chromosome 18 - NC_091110.1Genomic Context describing neighboring genes Neighboring gene heat shock protein 30-like Neighboring gene heat shock protein 30-like Neighboring gene SMAD family member 2 Neighboring gene SKI family transcriptional corepressor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024713975.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2471397v2 Primary Assembly

Genomic

  1. NC_091110.1 Reference ASM2471397v2 Primary Assembly

    Range
    15860612..15865272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020082135.2 → XP_019937694.2  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    Related
    ENSPOLP00010015921.1, ENSPOLT00010019336.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases