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ndst1 N-deacetylase and N-sulfotransferase 1 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109625718, updated on 9-Nov-2023

Summary

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Gene symbol
ndst1
Gene description
N-deacetylase and N-sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
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Genomic context

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See ndst1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859641.1 (7064747..7110278)

NW_017859641.1Genomic Context describing neighboring genes Neighboring gene soluble guanylate cyclase 88E-like Neighboring gene myozenin-2-like Neighboring gene RNA binding motif protein 22 Neighboring gene kinesin-like protein KIN-4A Neighboring gene CD74 molecule, major histocompatibility complex, class II invariant chain a Neighboring gene solute carrier family 35 member A4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859641.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859641.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    7064747..7110278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020081116.1 → XP_019936675.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

    Conserved Domains (2) summary
    pfam00685
    Location:612 → 862
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:28 → 522
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
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