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LOC109625605 torsin-1A-interacting protein 2-like [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109625605, updated on 5-Nov-2024

Summary

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Gene symbol
LOC109625605
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSPOLG00010014989
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
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Genomic context

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See LOC109625605 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_10 current ASM2471397v2 (GCF_024713975.1) 3 NC_091095.1 (15401657..15405909, complement)
100 previous assembly Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859646.1 (11750603..11754782)

Chromosome 3 - NC_091095.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 6 Neighboring gene olfactomedin-like 2Ba Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene ferric-chelate reductase 1-like Neighboring gene chemokine (C motif) receptor 1a, duplicate 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024713975.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2471397v2 Primary Assembly

Genomic

  1. NC_091095.1 Reference ASM2471397v2 Primary Assembly

    Range
    15401657..15405909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_069522173.1 → XP_069378274.1  torsin-1A-interacting protein 2-like isoform X2

    Related
    ENSPOLP00010039182.1, ENSPOLT00010043796.1

  2. XM_020080888.2 → XP_019936447.2  torsin-1A-interacting protein 2-like isoform X1

    Related
    ENSPOLP00010039186.1, ENSPOLT00010043800.1
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases