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dpy19l3 dpy-19 like C-mannosyltransferase 3 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109625202, updated on 29-Oct-2024

Summary

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Gene symbol
dpy19l3
Gene description
dpy-19 like C-mannosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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See dpy19l3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_10 current ASM2471397v2 (GCF_024713975.1) 1 NC_091093.1 (4866733..4921997)
100 previous assembly Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859645.1 (14664727..14712803, complement)

Chromosome 1 - NC_091093.1Genomic Context describing neighboring genes Neighboring gene putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog Neighboring gene zinc finger protein 507 Neighboring gene neural-cadherin Neighboring gene MTSS I-BAR domain containing 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein C-mannosyl-transferase DPY19L3
Names
dpy-19 like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024713975.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2471397v2 Primary Assembly

Genomic

  1. NC_091093.1 Reference ASM2471397v2 Primary Assembly

    Range
    4866733..4921997
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020080343.2 → XP_019935902.1  protein C-mannosyl-transferase DPY19L3 isoform X3

    Conserved Domains (1) summary
    pfam10034
    Location:59 → 716
    Dpy19; Q-cell neuroblast polarisation

  2. XM_020080344.2 → XP_019935903.1  protein C-mannosyl-transferase DPY19L3 isoform X4

    Conserved Domains (1) summary
    pfam10034
    Location:59 → 715
    Dpy19; Q-cell neuroblast polarisation

  3. XM_069532240.1 → XP_069388341.1  protein C-mannosyl-transferase DPY19L3 isoform X1

  4. XM_069532288.1 → XP_069388389.1  protein C-mannosyl-transferase DPY19L3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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