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SNORA115 small nucleolar RNA, H/ACA box 115 [ Homo sapiens (human) ]

Gene ID: 109623482, updated on 10-Oct-2023

Summary

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Official Symbol
SNORA115provided by HGNC
Official Full Name
small nucleolar RNA, H/ACA box 115provided by HGNC
Primary source
HGNC:HGNC:51853
See related
AllianceGenome:HGNC:51853
Gene type
snoRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See SNORA115 in Genome Data Viewer
Location:
2q35
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (217833590..217833733, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (218318451..218318594, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (218698313..218698456, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene disrupted in renal carcinoma 3 Neighboring gene ATPase H+/K+ transporting non-gastric alpha2 subunit pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17106 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12308 Neighboring gene Sharpr-MPRA regulatory region 7557 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:218661013-218661513 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17108 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17109 Neighboring gene RPL7L1 pseudogene 9 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:218678100-218679299 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:218684858-218685358 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17110 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:218737749-218738250 Neighboring gene tensin 1 Neighboring gene Sharpr-MPRA regulatory region 15318 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:218793628-218794497 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:218794829-218795372 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:218798027-218798526 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:218799196-218799704 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:218799705-218800214 Neighboring gene VISTA enhancer hs1764 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:218808487-218809332 Neighboring gene microRNA 6809 Neighboring gene uncharacterized LOC124905960

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An updated human snoRNAome. Jorjani H, et al. Nucleic Acids Res, 2016 Jun 20. PMID 27174936, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145792.2 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC009469

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    217833590..217833733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    218318451..218318594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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