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SNORD161 small nucleolar RNA, C/D box 161 [ Homo sapiens (human) ]

Gene ID: 109623453, updated on 10-Oct-2023

Summary

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Official Symbol
SNORD161provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 161provided by HGNC
Primary source
HGNC:HGNC:51875
See related
AllianceGenome:HGNC:51875
Gene type
snoRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q21.21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (78288985..78289050)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (81630171..81630236)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (79210139..79210204)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986293 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:79013872-79014616 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:79026548-79027162 Neighboring gene Fraser extracellular matrix complex subunit 1 Neighboring gene SERPINE1 mRNA binding protein 1 pseudogene 5 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:79143534-79144418 Neighboring gene Sharpr-MPRA regulatory region 11576 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:79228222-79228817 Neighboring gene MICOS10 pseudogene 4 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:79402250-79403449 Neighboring gene Sharpr-MPRA regulatory region 1185 Neighboring gene Sharpr-MPRA regulatory region 14158 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:79455131-79456330 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:79473344-79474543 Neighboring gene annexin A3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An updated human snoRNAome. Jorjani H, et al. Nucleic Acids Res, 2016 Jun 20. PMID 27174936, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145782.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC131945

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    78288985..78289050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    81630171..81630236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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