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SNORD65C small nucleolar RNA, C/D box 65C [ Homo sapiens (human) ]

Gene ID: 109616981, updated on 10-Oct-2023

Summary

Official Symbol
SNORD65Cprovided by HGNC
Official Full Name
small nucleolar RNA, C/D box 65Cprovided by HGNC
Primary source
HGNC:HGNC:52232
See related
Ensembl:ENSG00000212264 AllianceGenome:HGNC:52232
Gene type
snoRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See SNORD65C in Genome Data Viewer
Location:
7p15.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (23396446..23396516)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (23532887..23532957)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (23436065..23436135)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25723 Neighboring gene MPRA-validated peak6433 silencer Neighboring gene glycoprotein nmb Neighboring gene ReSE screen-validated silencer GRCh37_chr7:23311287-23311491 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18007 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18008 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25724 Neighboring gene MPRA-validated peak6435 silencer Neighboring gene mitochondrial assembly of ribosomal large subunit 1 Neighboring gene insulin like growth factor 2 mRNA binding protein 3 Neighboring gene Sharpr-MPRA regulatory region 6228 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:23394340-23394499 Neighboring gene Sharpr-MPRA regulatory region 10260 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25725 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:23474935-23475436 Neighboring gene RNA, U7 small nuclear 143 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25726 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:23508953-23509537 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18011 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25727 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25728 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18012 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25729 Neighboring gene chromosome 5 open reading frame 13 pseudogene

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145734.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC021876
    Related
    ENST00000390962.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    23396446..23396516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    23532887..23532957
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)