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SNORA48B small nucleolar RNA, H/ACA box 48B [ Homo sapiens (human) ]

Gene ID: 109616969, updated on 10-Oct-2023

Summary

Official Symbol
SNORA48Bprovided by HGNC
Official Full Name
small nucleolar RNA, H/ACA box 48Bprovided by HGNC
Primary source
HGNC:HGNC:52207
See related
Ensembl:ENSG00000212214 AllianceGenome:HGNC:52207
Gene type
snoRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See SNORA48B in Genome Data Viewer
Location:
Xp22.33
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (3532117..3532251, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (3146319..3146453, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (3450158..3450292, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene matrix remodeling associated 5 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:3280933-3281483 Neighboring gene argininosuccinate synthetase 1 pseudogene 4 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chrX:3445471-3446670 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:3470673-3471624 Neighboring gene RNA, U6 small nuclear 114, pseudogene Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:3509707-3510638 Neighboring gene RNA, U6 small nuclear 146, pseudogene Neighboring gene protein kinase cAMP-dependent X-linked catalytic subunit

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145722.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC141001
    Related
    ENST00000390912.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    3532117..3532251 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    3146319..3146453 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)