U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PTPMT1 protein tyrosine phosphatase, mitochondrial 1 [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 109610640, updated on 1-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
PTPMT1
Gene description
protein tyrosine phosphatase, mitochondrial 1
Locus tag
DMN91_012946
See related
EnsemblRapid:LOC109610640
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PTPMT1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 14 NC_039519.1 (2270671..2311870, complement)

Chromosome 14 - NC_039519.1Genomic Context describing neighboring genes Neighboring gene neprilysin Neighboring gene alpha- and gamma-adaptin-binding protein p34 Neighboring gene alanine--tRNA ligase, mitochondrial Neighboring gene syntaxin-binding protein tomosyn Neighboring gene uncharacterized LOC105286622 Neighboring gene zinc finger protein Elbow

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_039519.1 Chromosome 14 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylglycerophosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GTPase grn1; mitochondrial GTPase 1; phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1
Names
Protein-tyrosine phosphatase mitochondrial 1-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039519.1 Reference Obir_v5.4

    Range
    2270671..2311870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011351673.2 → XP_011349975.1  phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 isoform X3

    See identical proteins and their annotated locations for XP_011349975.1

    UniProtKB/TrEMBL
    A0A3L8D487
    Related
    XP_011349975.1, XM_011351673.2
    Conserved Domains (1) summary
    cl21483
    Location:44 → 194
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  2. XM_026975028.1 → XP_026830829.1  GTPase grn1 isoform X4

    Related
    XP_026830829.1, XM_026975028.1
    Conserved Domains (2) summary
    cd01856
    Location:24 → 201
    YlqF; Circularly permuted YlqF GTPase
    cl21483
    Location:247 → 397
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  3. XM_020034040.2 → XP_019889599.1  phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 isoform X2

    UniProtKB/TrEMBL
    A0A026VUG6
    Related
    XP_019889599.1, XM_020034040.2
    Conserved Domains (1) summary
    cl21483
    Location:51 → 201
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  4. XM_011351675.2 → XP_011349977.1  phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 isoform X3

    See identical proteins and their annotated locations for XP_011349977.1

    UniProtKB/TrEMBL
    A0A3L8D487
    Related
    XP_011349977.1, XM_011351675.2
    Conserved Domains (1) summary
    cl21483
    Location:44 → 194
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  5. XM_020034039.2 → XP_019889598.1  mitochondrial GTPase 1 isoform X1

    UniProtKB/TrEMBL
    A0A3L8D3T5
    Related
    XP_019889598.1, XM_020034039.2
    Conserved Domains (1) summary
    cl26335
    Location:22 → 314
    RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.