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LOC109605152 xylosyltransferase oxt [ Aethina tumida (small hive beetle) ]

Gene ID: 109605152, updated on 10-May-2024

Summary

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Gene symbol
LOC109605152
Gene description
xylosyltransferase oxt
See related
EnsemblRapid:ENSATDG00005008933
Gene type
protein coding
RefSeq status
MODEL
Organism
Aethina tumida
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Nitidulidae; Nitidulinae; Aethina
Orthologs
fruit fly all
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Genomic context

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See LOC109605152 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
101 current icAetTumi1.1 (GCF_024364675.1) 2 NC_065436.1 (1937120..1940210)
100 previous assembly Atum_1.0 (GCF_001937115.1) Unplaced Scaffold NW_017853640.1 (47738..51327)

Chromosome 2 - NC_065436.1Genomic Context describing neighboring genes Neighboring gene WD repeat-containing protein 3 Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene tonsoku-like protein Neighboring gene BUD13 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase oxt

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aethina tumida Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icAetTumi1.1 Primary Assembly

Genomic

  1. NC_065436.1 Reference icAetTumi1.1 Primary Assembly

    Range
    1937120..1940210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020021723.2 → XP_019877282.2  xylosyltransferase oxt

    Related
    ENSATDP00005013841.1, ENSATDT00005015271.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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