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LOC109602692 GDP-fucose protein O-fucosyltransferase 2 [ Aethina tumida (small hive beetle) ]

Gene ID: 109602692, updated on 10-May-2024

Summary

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Gene symbol
LOC109602692
Gene description
GDP-fucose protein O-fucosyltransferase 2
See related
EnsemblRapid:ENSATDG00005001663
Gene type
protein coding
RefSeq status
MODEL
Organism
Aethina tumida
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Nitidulidae; Nitidulinae; Aethina
Orthologs
fruit fly all
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Genomic context

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See LOC109602692 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
101 current icAetTumi1.1 (GCF_024364675.1) 1 NC_065435.1 (56123783..56125554, complement)
100 previous assembly Atum_1.0 (GCF_001937115.1) Unplaced Scaffold NW_017852943.1 (435236..436966)

Chromosome 1 - NC_065435.1Genomic Context describing neighboring genes Neighboring gene tear acid lipase-like protein Neighboring gene tear acid lipase-like protein Neighboring gene uncharacterized LOC109602702 Neighboring gene C1 family peptidase 26-29-p Neighboring gene mitochondrial ribosomal protein L39

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aethina tumida Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icAetTumi1.1 Primary Assembly

Genomic

  1. NC_065435.1 Reference icAetTumi1.1 Primary Assembly

    Range
    56123783..56125554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020019121.2 → XP_019874680.1  GDP-fucose protein O-fucosyltransferase 2

    Related
    ENSATDP00005002834.1, ENSATDT00005002913.1
    Conserved Domains (1) summary
    cd11298
    Location:40 → 408
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
Nucleotide Protein
Heading Accession and Version

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