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LOC109598090 aspartyl/asparaginyl beta-hydroxylase [ Aethina tumida (small hive beetle) ]

Gene ID: 109598090, updated on 10-May-2024

Summary

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Gene symbol
LOC109598090
Gene description
aspartyl/asparaginyl beta-hydroxylase
See related
EnsemblRapid:ENSATDG00005002299
Gene type
protein coding
RefSeq status
MODEL
Organism
Aethina tumida
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Nitidulidae; Nitidulinae; Aethina
Orthologs
fruit fly all
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Genomic context

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See LOC109598090 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
101 current icAetTumi1.1 (GCF_024364675.1) 1 NC_065435.1 (13085551..13125424)
100 previous assembly Atum_1.0 (GCF_001937115.1) Unplaced Scaffold NW_017853083.1 (250974..290473, complement)

Chromosome 1 - NC_065435.1Genomic Context describing neighboring genes Neighboring gene gamma-2-syntrophin Neighboring gene atrial natriuretic peptide-converting enzyme Neighboring gene uncharacterized LOC126264258 Neighboring gene ATP-binding cassette subfamily C member 4 Neighboring gene Hairy/E(spl)-related with YRPW motif Neighboring gene transmembrane protein 63

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aethina tumida Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icAetTumi1.1 Primary Assembly

Genomic

  1. NC_065435.1 Reference icAetTumi1.1 Primary Assembly

    Range
    13085551..13125424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020013917.2 → XP_019869476.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

    Conserved Domains (4) summary
    COG0457
    Location:553 → 743
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:646 → 676
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:786 → 937
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam07423
    Location:252 → 317
    DUF1510; Protein of unknown function (DUF1510)

  2. XM_020013919.2 → XP_019869478.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

    Conserved Domains (4) summary
    COG0457
    Location:537 → 727
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:630 → 660
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:770 → 921
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam07423
    Location:252 → 317
    DUF1510; Protein of unknown function (DUF1510)

  3. XM_049961202.1 → XP_049817159.1  aspartyl/asparaginyl beta-hydroxylase isoform X3

    Related
    ENSATDP00005003930.1, ENSATDT00005004044.1
Nucleotide Protein
Heading Accession and Version

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