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CLIP2 CAP-Gly domain containing linker protein 2 [ Bos indicus (zebu cattle) ]

Gene ID: 109578706, updated on 14-Mar-2024

Summary

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Gene symbol
CLIP2
Gene description
CAP-Gly domain containing linker protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CLIP2 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 25 NC_032674.1 (35108928..35183575, complement)

Chromosome 25 - NC_032674.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIi Neighboring gene GTF2I repeat domain containing 1 Neighboring gene replication factor C subunit 2 Neighboring gene LIM domain kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032674.1 Chromosome 25 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CAP-Gly domain-containing linker protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032674.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    35108928..35183575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019988161.1 → XP_019843720.1  CAP-Gly domain-containing linker protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P5E2T2
    Conserved Domains (2) summary
    pfam01302
    Location:220 → 284
    CAP_GLY; CAP-Gly domain
    cl25732
    Location:356 → 935
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_019988160.1 → XP_019843719.1  CAP-Gly domain-containing linker protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P5E096
    Conserved Domains (2) summary
    pfam01302
    Location:220 → 284
    CAP_GLY; CAP-Gly domain
    cl25732
    Location:356 → 970
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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