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OTOA otoancorin [ Bos indicus (zebu cattle) ]

Gene ID: 109578128, updated on 14-Mar-2024

Summary

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Gene symbol
OTOA
Gene description
otoancorin
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See OTOA in Genome Data Viewer
Location:
chromosome: 25
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 25 NC_032674.1 (21404914..21454713)

Chromosome 25 - NC_032674.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 180-like Neighboring gene uncharacterized LOC109578496 Neighboring gene methyltransferase 9, His-X-His N1(pi)-histidine Neighboring gene immunoglobulin superfamily member 6 Neighboring gene otoancorin-like Neighboring gene ly-6/neurotoxin-like protein 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032674.1 Chromosome 25 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
otoancorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032674.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    21404914..21454713
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019987127.1 → XP_019842686.1  otoancorin

    UniProtKB/TrEMBL
    A0A6P5DWG6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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