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SKIC8 SKI8 subunit of superkiller complex [ Bos indicus (zebu cattle) ]

Gene ID: 109575413, updated on 14-Mar-2024

Summary

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Gene symbol
SKIC8
Gene description
SKI8 subunit of superkiller complex
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
WDR61
Orthologs
human mouse all
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Genomic context

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See SKIC8 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 21 NC_032670.1 (30728989..30748163, complement)

Chromosome 21 - NC_032670.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase bubblegum family member 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member A4 Neighboring gene POU domain, class 5, transcription factor 1 pseudogene Neighboring gene cellular retinoic acid binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032670.1 Chromosome 21 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 61
Names
WD repeat domain 61

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032670.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    30728989..30748163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019983510.1 → XP_019839069.1  WD repeat-containing protein 61

    UniProtKB/TrEMBL
    A0A6P5DMJ1
    Conserved Domains (2) summary
    cd00200
    Location:13 → 302
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:110 → 146
    7WD40; WD40 repeat [structural motif]

  2. XM_019983511.1 → XP_019839070.1  WD repeat-containing protein 61

    UniProtKB/TrEMBL
    A0A6P5DMJ1
    Conserved Domains (2) summary
    cd00200
    Location:13 → 302
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:110 → 146
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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