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DLX4 distal-less homeobox 4 [ Bos indicus (zebu cattle) ]

Gene ID: 109574593, updated on 14-Mar-2024

Summary

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Gene symbol
DLX4
Gene description
distal-less homeobox 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See DLX4 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 19 NC_032668.1 (37874608..37880390, complement)

Chromosome 19 - NC_032668.1Genomic Context describing neighboring genes Neighboring gene integrin subunit alpha 3 Neighboring gene distal-less homeobox 3 Neighboring gene uncharacterized LOC109573468 Neighboring gene tachykinin precursor 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032668.1 Chromosome 19 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryo development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein DLX-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032668.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    37874608..37880390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019982647.1 → XP_019838206.1  homeobox protein DLX-4 isoform X1

    UniProtKB/TrEMBL
    A0A6P5DJ89
    Conserved Domains (1) summary
    pfam00046
    Location:114 → 167
    Homeobox; Homeobox domain

  2. XM_019982648.1 → XP_019838207.1  homeobox protein DLX-4 isoform X2

    UniProtKB/TrEMBL
    A0A6P5DMA7
    Conserved Domains (2) summary
    smart00389
    Location:112 → 154
    HOX; Homeodomain
    cl26386
    Location:2 → 121
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
Nucleotide Protein
Heading Accession and Version

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