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LPIN3 lipin 3 [ Bos indicus (zebu cattle) ]

Gene ID: 109567456, updated on 14-Mar-2024

Summary

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Gene symbol
LPIN3
Gene description
lipin 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See LPIN3 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 13 NC_032662.1 (70697210..70715538)

Chromosome 13 - NC_032662.1Genomic Context describing neighboring genes Neighboring gene zinc fingers and homeoboxes 3 Neighboring gene estrogen receptor binding site associated antigen 9 Neighboring gene elastin microfibril interfacer 3 Neighboring gene chromodomain helicase DNA binding protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032662.1 Chromosome 13 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032662.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    70697210..70715538
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019972427.1 → XP_019827986.1  phosphatidate phosphatase LPIN3

    UniProtKB/TrEMBL
    A0A6P5CPJ0
    Conserved Domains (4) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:592 → 817
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:438 → 528
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain
    cl28033
    Location:93 → 451
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
Nucleotide Protein
Heading Accession and Version

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