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LPIN1 lipin 1 [ Bos indicus (zebu cattle) ]

Gene ID: 109566377, updated on 14-Mar-2024

Summary

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Gene symbol
LPIN1
Gene description
lipin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See LPIN1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
25
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 11 NC_032660.1 (88812725..88988278, complement)

Chromosome 11 - NC_032660.1Genomic Context describing neighboring genes Neighboring gene S-phase kinase-associated protein 2 pseudogene Neighboring gene uncharacterized LOC109566376 Neighboring gene tribbles pseudokinase 2 Neighboring gene neurotensin receptor 2 Neighboring gene growth regulating estrogen receptor binding 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032660.1 Chromosome 11 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032660.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    88812725..88988278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019970683.1 → XP_019826242.1  phosphatidate phosphatase LPIN1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5CMW1
    Conserved Domains (3) summary
    pfam04571
    Location:50 → 156
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:715 → 940
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:553 → 643
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  2. XM_019970686.1 → XP_019826245.1  phosphatidate phosphatase LPIN1 isoform X3

    UniProtKB/TrEMBL
    A0A6P5CKR4
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:631 → 856
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:469 → 559
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  3. XM_019970685.1 → XP_019826244.1  phosphatidate phosphatase LPIN1 isoform X2

    UniProtKB/TrEMBL
    A0A6P5CLZ5
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:666 → 891
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:504 → 594
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  4. XM_019970684.1 → XP_019826243.1  phosphatidate phosphatase LPIN1 isoform X2

    UniProtKB/TrEMBL
    A0A6P5CLZ5
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:666 → 891
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:504 → 594
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain
Nucleotide Protein
Heading Accession and Version

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