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ARL4C ARF like GTPase 4C [ Bos indicus (zebu cattle) ]

Gene ID: 109556559, updated on 20-Sep-2024

Summary

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Gene symbol
ARL4C
Gene description
ARF like GTPase 4C
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ARL4C in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 3 NC_032652.1 (121416601..121420371, complement)

Chromosome 3 - NC_032652.1Genomic Context describing neighboring genes Neighboring gene secreted phosphoprotein 2 Neighboring gene uncharacterized LOC109556557 Neighboring gene uncharacterized LOC109556558 Neighboring gene SH3 domain binding protein 4 Neighboring gene uncharacterized LOC109557112

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032652.1 Chromosome 3 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 4C
Names
ADP ribosylation factor like GTPase 4C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032652.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    121416601..121420371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019957953.1 → XP_019813512.1  ADP-ribosylation factor-like protein 4C

    UniProtKB/TrEMBL
    A0A6P5BIX7
    Conserved Domains (1) summary
    cd04152
    Location:11 → 192
    Arl4_Arl7; Arf-like 4 (Arl4) and 7 (Arl7) GTPases
Nucleotide Protein
Heading Accession and Version

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