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LOC109555542 polyadenylate-binding protein 1-like 2 [ Bos indicus (zebu cattle) ]

Gene ID: 109555542, updated on 9-Nov-2023

Summary

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Gene symbol
LOC109555542
Gene description
polyadenylate-binding protein 1-like 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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Genomic context

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See LOC109555542 in Genome Data Viewer
Location:
chromosome: X
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) X NC_032679.1 (47723774..47726401)

Chromosome X - NC_032679.1Genomic Context describing neighboring genes Neighboring gene doublesex- and mab-3-related transcription factor C2-like Neighboring gene elongation factor 1-alpha 1 pseudogene Neighboring gene centromere protein R-like Neighboring gene 40S ribosomal protein S4, X isoform Neighboring gene ERCC excision repair 6 like, spindle assembly checkpoint helicase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032679.1 Chromosome X Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A) binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(U) RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyadenylate-binding protein 1-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032679.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    47723774..47726401
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019956484.1 → XP_019812043.1  polyadenylate-binding protein 1-like 2

    Conserved Domains (1) summary
    cl25887
    Location:2 → 196
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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