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PABPC5 poly(A) binding protein cytoplasmic 5 [ Bos indicus (zebu cattle) ]

Gene ID: 109555516, updated on 14-Mar-2024

Summary

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Gene symbol
PABPC5
Gene description
poly(A) binding protein cytoplasmic 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See PABPC5 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) X NC_032679.1 (25323074..25325301)

Chromosome X - NC_032679.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109555044 Neighboring gene uncharacterized LOC109555018 Neighboring gene ubiquitin-conjugating enzyme E2 D2-like Neighboring gene hepatoma-derived growth factor-related protein 3 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032679.1 Chromosome X Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyadenylate-binding protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032679.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    25323074..25325301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019956449.1 → XP_019812008.1  polyadenylate-binding protein 5

    UniProtKB/TrEMBL
    A0A6P5AZJ1
    Conserved Domains (1) summary
    cl25887
    Location:22 → 379
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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