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CH25H cholesterol 25-hydroxylase [ Bos indicus (zebu cattle) ]

Gene ID: 109553211, updated on 14-Mar-2024

Summary

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Gene symbol
CH25H
Gene description
cholesterol 25-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CH25H in Genome Data Viewer
Location:
chromosome: 26
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 26 NC_032675.1 (11446869..11449077, complement)

Chromosome 26 - NC_032675.1Genomic Context describing neighboring genes Neighboring gene actin alpha 2, smooth muscle Neighboring gene Fas cell surface death receptor Neighboring gene uncharacterized LOC109579143 Neighboring gene lipase A, lysosomal acid type Neighboring gene DNA fragmentation factor subunit alpha pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032675.1 Chromosome 26 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholesterol 25-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032675.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    11446869..11449077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019953196.1 → XP_019808755.1  cholesterol 25-hydroxylase

    UniProtKB/TrEMBL
    A0A6P5BGU5
    Conserved Domains (1) summary
    pfam04116
    Location:128 → 263
    FA_hydroxylase; Fatty acid hydroxylase superfamily

  2. XM_019953195.1 → XP_019808754.1  cholesterol 25-hydroxylase

    UniProtKB/TrEMBL
    A0A6P5BGU5
    Conserved Domains (1) summary
    pfam04116
    Location:128 → 263
    FA_hydroxylase; Fatty acid hydroxylase superfamily
Nucleotide Protein
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