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CtBP C-terminal binding protein [ Dendroctonus ponderosae (mountain pine beetle) ]

Gene ID: 109539623, updated on 23-May-2024

Summary

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Gene symbol
CtBP
Gene description
C-terminal binding protein
See related
EnsemblRapid:LOC109539623
Gene type
protein coding
RefSeq status
MODEL
Organism
Dendroctonus ponderosae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Scolytinae; Dendroctonus
Orthologs
fruit fly all
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Genomic context

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See CtBP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Dpon_F_20191213v2 (GCF_020466585.1) Unplaced Scaffold NW_026018715.1 (7691286..7704861)
100 previous assembly DendPond_male_1.0 (GCF_000355655.1) Unplaced Scaffold NW_017852103.1 (1698458..1711978)

NW_026018715.1Genomic Context describing neighboring genes Neighboring gene E3 SUMO-protein ligase ZBED1 Neighboring gene pre-mRNA processing factor 31 Neighboring gene U3 small nucleolar ribonucleoprotein protein MPP10 Neighboring gene dedicator of cytokinesis protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Quantitative metabolome, proteome and transcriptome analysis of midgut and fat body tissues in the mountain pine beetle, Dendroctonus ponderosae Hopkins, and insights into pheromone biosynthesis. Keeling CI, et al. Insect Biochem Mol Biol, 2016 Mar. PMID 26792242

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dendroctonus ponderosae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dpon_F_20191213v2

Genomic

  1. NW_026018715.1 Reference Dpon_F_20191213v2

    Range
    7691286..7704861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019907490.2 → XP_019763049.1  C-terminal-binding protein isoform X3

    Related
    XP_019763049.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_019907488.2 → XP_019763047.1  C-terminal-binding protein isoform X1

    UniProtKB/TrEMBL
    U4UHK9
    Related
    XP_019763047.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_019907491.2 → XP_019763050.1  C-terminal-binding protein isoform X4

    Related
    XP_019763050.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_019907489.2 → XP_019763048.1  C-terminal-binding protein isoform X2

    UniProtKB/TrEMBL
    N6U4A8
    Related
    XP_019763048.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_048666552.1 → XP_048522509.1  C-terminal-binding protein isoform X1

    UniProtKB/TrEMBL
    U4UHK9

RNA

  1. XR_002172132.2 RNA Sequence

  2. XR_002172133.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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