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galnt3 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109527130, updated on 14-Mar-2024

Summary

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Gene symbol
galnt3
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
See related
Ensembl:ENSHCOG00000002522
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805876.1 (102118..113445)

NW_017805876.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 21B-like Neighboring gene tetratricopeptide repeat domain 21B Neighboring gene cysteine-serine-rich nuclear protein 3 Neighboring gene uncharacterized LOC109527132

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805876.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805876.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    102118..113445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019888848.1 → XP_019744407.1  polypeptide N-acetylgalactosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A3Q3D3H3
    Related
    ENSHCOP00000001549.1, ENSHCOT00000011924.1
    Conserved Domains (2) summary
    cd02510
    Location:198 → 503
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:515 → 637
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_019888850.1 → XP_019744409.1  polypeptide N-acetylgalactosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A3Q3D3H3
    Conserved Domains (2) summary
    cd02510
    Location:198 → 503
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:515 → 637
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_019888849.1 → XP_019744408.1  polypeptide N-acetylgalactosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A3Q3D3H3
    Conserved Domains (2) summary
    cd02510
    Location:198 → 503
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:515 → 637
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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