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hs3st1l1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1 [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109523019, updated on 14-Mar-2024

Summary

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Gene symbol
hs3st1l1
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1
See related
Ensembl:ENSHCOG00000005890
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805695.1 (4319899..4353008, complement)

NW_017805695.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109523061 Neighboring gene ventral expressed homeobox Neighboring gene deoxynucleotidyltransferase, terminal Neighboring gene uncharacterized LOC109523080 Neighboring gene B cell linker

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805695.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805695.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    4319899..4353008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019881859.1 → XP_019737418.1  heparan sulfate glucosamine 3-O-sulfotransferase 1-like

    UniProtKB/TrEMBL
    A0A3Q2XIY2
    Conserved Domains (1) summary
    pfam00685
    Location:48 → 250
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_019881858.1 → XP_019737417.1  heparan sulfate glucosamine 3-O-sulfotransferase 1-like

    UniProtKB/TrEMBL
    A0A3Q2XIY2
    Related
    ENSHCOP00000004423.1, ENSHCOT00000007056.1
    Conserved Domains (1) summary
    pfam00685
    Location:48 → 250
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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