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r3hdm2 R3H domain containing 2 [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109510612, updated on 14-Mar-2024

Summary

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Gene symbol
r3hdm2
Gene description
R3H domain containing 2
See related
Ensembl:ENSHCOG00000001142
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017842058.1 (564663..615429, complement)

NW_017842058.1Genomic Context describing neighboring genes Neighboring gene neurexophilin 4 Neighboring gene SH3 and cysteine rich domain 3 Neighboring gene inhibin beta B chain-like Neighboring gene GLI family zinc finger 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017842058.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
R3H domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017842058.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    564663..615429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019861037.1 → XP_019716596.1  R3H domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2XK90
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:730 → 899
    PAT1; Topoisomerase II-associated protein PAT1

  2. XM_019861041.1 → XP_019716600.1  R3H domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2XK90
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:730 → 899
    PAT1; Topoisomerase II-associated protein PAT1

  3. XM_019861044.1 → XP_019716603.1  R3H domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2XK90
    Conserved Domains (3) summary
    cd02642
    Location:164 → 225
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:248 → 298
    SUZ; SUZ domain
    cl25764
    Location:723 → 892
    PAT1; Topoisomerase II-associated protein PAT1

  4. XM_019861042.1 → XP_019716601.1  R3H domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2XK90
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:724 → 893
    PAT1; Topoisomerase II-associated protein PAT1

  5. XM_019861045.1 → XP_019716604.1  R3H domain-containing protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2XK90
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:712 → 881
    PAT1; Topoisomerase II-associated protein PAT1

  6. XM_019861048.1 → XP_019716607.1  R3H domain-containing protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A3Q2XK77
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:697 → 866
    PAT1; Topoisomerase II-associated protein PAT1

  7. XM_019861046.1 → XP_019716605.1  R3H domain-containing protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2XK77
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:710 → 879
    PAT1; Topoisomerase II-associated protein PAT1

  8. XM_019861036.1 → XP_019716595.1  R3H domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2XK90
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:730 → 899
    PAT1; Topoisomerase II-associated protein PAT1

  9. XM_019861038.1 → XP_019716597.1  R3H domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2XK90
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:730 → 899
    PAT1; Topoisomerase II-associated protein PAT1

  10. XM_019861049.1 → XP_019716608.1  R3H domain-containing protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A3Q2XK77
    Related
    ENSHCOP00000000336.1, ENSHCOT00000013934.1
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:673 → 842
    PAT1; Topoisomerase II-associated protein PAT1

  11. XM_019861047.1 → XP_019716606.1  R3H domain-containing protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A3Q2XK90
    Related
    ENSHCOP00000000351.1, ENSHCOT00000013924.1
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:706 → 875
    PAT1; Topoisomerase II-associated protein PAT1

  12. XM_019861039.1 → XP_019716598.1  R3H domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2XK90
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:730 → 899
    PAT1; Topoisomerase II-associated protein PAT1

  13. XM_019861040.1 → XP_019716599.1  R3H domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2XK90
    Conserved Domains (3) summary
    cd02642
    Location:171 → 232
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam12752
    Location:255 → 305
    SUZ; SUZ domain
    cl25764
    Location:730 → 899
    PAT1; Topoisomerase II-associated protein PAT1
Nucleotide Protein
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