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LOC109479017 uncharacterized LOC109479017 [ Branchiostoma belcheri (Belcher's lancelet) ]

Gene ID: 109479017, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109479017
Gene description
uncharacterized LOC109479017
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma belcheri
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC109479017 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Haploidv18h27 (GCF_001625305.1) Unplaced Scaffold NW_017804087.1 (1599200..1610399, complement)

NW_017804087.1Genomic Context describing neighboring genes Neighboring gene pyrroline-5-carboxylate reductase 1, mitochondrial-like Neighboring gene uncharacterized LOC109478957 Neighboring gene galactosylceramide sulfotransferase-like Neighboring gene uncharacterized LOC109479003

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017804087.1 Unplaced Scaffold Reference Haploidv18h27 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC109479017

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma belcheri Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haploidv18h27 Primary Assembly

Genomic

  1. NW_017804087.1 Reference Haploidv18h27 Primary Assembly

    Range
    1599200..1610399 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019780860.1 → XP_019636419.1  uncharacterized protein LOC109479017

    UniProtKB/TrEMBL
    A0A6P4ZQS2
Nucleotide Protein
Heading Accession and Version

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