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LOC109467447 transmembrane and TPR repeat-containing protein 2-like [ Branchiostoma belcheri (Belcher's lancelet) ]

Gene ID: 109467447, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109467447
Gene description
transmembrane and TPR repeat-containing protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma belcheri
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC109467447 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Haploidv18h27 (GCF_001625305.1) Unplaced Scaffold NW_017803268.1 (2765688..2816053)

NW_017803268.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109467318 Neighboring gene uncharacterized LOC109467342 Neighboring gene uncharacterized LOC109467319 Neighboring gene uncharacterized LOC109467433

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017803268.1 Unplaced Scaffold Reference Haploidv18h27 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma belcheri Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haploidv18h27 Primary Assembly

Genomic

  1. NW_017803268.1 Reference Haploidv18h27 Primary Assembly

    Range
    2765688..2816053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019765431.1 → XP_019620990.1  transmembrane and TPR repeat-containing protein 2-like

    UniProtKB/TrEMBL
    A0A6P4XWF8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases