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LOC109464466 probable C-mannosyltransferase DPY19L3 [ Branchiostoma belcheri (Belcher's lancelet) ]

Gene ID: 109464466, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109464466
Gene description
probable C-mannosyltransferase DPY19L3
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma belcheri
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC109464466 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Haploidv18h27 (GCF_001625305.1) Unplaced Scaffold NW_017802813.1 (270223..282131)

NW_017802813.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109464447 Neighboring gene U2 snRNP-associated SURP motif-containing protein-like Neighboring gene collagen alpha-5(IV) chain-like Neighboring gene collagen alpha-6(IV) chain-like Neighboring gene collagen alpha-2(IV) chain-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017802813.1 Unplaced Scaffold Reference Haploidv18h27 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: probable C-mannosyltransferase DPY19L3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma belcheri Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haploidv18h27 Primary Assembly

Genomic

  1. NW_017802813.1 Reference Haploidv18h27 Primary Assembly

    Range
    270223..282131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019761455.1 → XP_019617014.1  LOW QUALITY PROTEIN: probable C-mannosyltransferase DPY19L3

    UniProtKB/TrEMBL
    A0A6P4Y3M4
Nucleotide Protein
Heading Accession and Version

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