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LOC109461474 enhancer in intron 1 of Bmp7 [ Mus musculus (house mouse) ]

Gene ID: 109461474, updated on 9-Aug-2024

Summary

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Gene symbol
LOC109461474
Gene description
enhancer in intron 1 of Bmp7
Gene type
biological region
Feature type(s)
regulatory: enhancer, transcriptional_cis_regulatory_region
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rr366788
Summary
This region represents a highly conserved sequence that functions as an enhancer in the limbs, eye, and kidney, and is thought to regulate expression of the bone morphogenetic protein 7 gene. [provided by RefSeq, Dec 2016]
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Genomic context

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See LOC109461474 in Genome Data Viewer
Location:
chromosome: 2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (172775564..172776043)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (172933771..172934250)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 36156 Neighboring gene RIKEN cDNA 1700055K11 gene Neighboring gene VISTA enhancer mm75 Neighboring gene STARR-seq mESC enhancer starr_06603 Neighboring gene STARR-seq mESC enhancer starr_06604 Neighboring gene predicted gene, 36254 Neighboring gene bone morphogenetic protein 7 Neighboring gene predicted gene, 40010 Neighboring gene STARR-positive B cell enhancer ABC_E4526 Neighboring gene predicted gene, 52538 Neighboring gene STARR-positive B cell enhancer ABC_E6029 Neighboring gene STARR-seq mESC enhancer starr_06607 Neighboring gene SPO11 initiator of meiotic double stranded breaks Neighboring gene ribonucleic acid export 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Control of kidney, eye and limb expression of Bmp7 by an enhancer element highly conserved between species. Adams D, et al. Dev Biol, 2007 Nov 15. PMID 17936743, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • 217.1 enhancer
  • regulatory region 366788

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_052609.1 

    Range
    101..580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    172775564..172776043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version