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LOC109428707 regulator of nonsense transcripts 3B [ Aedes albopictus (Asian tiger mosquito) ]

Gene ID: 109428707, updated on 10-May-2024

Summary

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Gene symbol
LOC109428707
Gene description
regulator of nonsense transcripts 3B
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes albopictus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Orthologs
fruit fly all
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Genomic context

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See LOC109428707 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_01 current AalbF5 (GCF_035046485.1) 2 NC_085137.1 (305710917..305713295)
102 previous assembly Aalbo_primary.1 (GCF_006496715.1) Unplaced Scaffold NW_021838576.1 (49314964..49317330, complement)

Chromosome 2 - NC_085137.1Genomic Context describing neighboring genes Neighboring gene enoyl-CoA delta isomerase 2 Neighboring gene mitochondrial ribosomal protein S28 Neighboring gene uncharacterized LOC134288190 Neighboring gene exocyst complex component Sec15 Neighboring gene ubiquitin specific protease 10 Neighboring gene uncharacterized LOC134286657 Neighboring gene uncharacterized LOC134286658 Neighboring gene Glucose transporter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A de novo transcriptome of the Asian tiger mosquito, Aedes albopictus, to identify candidate transcripts for diapause preparation. Poelchau MF, et al. BMC Genomics, 2011 Dec 20. PMID 22185595, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulator of nonsense transcripts 3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035046485.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AalbF5 Primary Assembly

Genomic

  1. NC_085137.1 Reference AalbF5 Primary Assembly

    Range
    305710917..305713295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019704528.3 → XP_019560073.3  regulator of nonsense transcripts 3B

Nucleotide Protein Strain
Heading Accession and Version

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