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Dbp80 putative ATP-dependent RNA helicase Dbp80 [ Aedes albopictus (Asian tiger mosquito) ]

Gene ID: 109399955, updated on 6-Jun-2024

Summary

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Gene symbol
Dbp80
Gene description
putative ATP-dependent RNA helicase Dbp80
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes albopictus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Orthologs
fruit fly all
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Genomic context

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See Dbp80 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_01 current AalbF5 (GCF_035046485.1) 1 NC_085136.1 (232367590..232370395, complement)
102 previous assembly Aalbo_primary.1 (GCF_006496715.1) Unplaced Scaffold NW_021838410.1 (10770748..10773812)

Chromosome 1 - NC_085136.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134285518 Neighboring gene GDNF-inducible zinc finger protein 1 Neighboring gene transfer RNA histidin (anticodon GUG) Neighboring gene transfer RNA histidin (anticodon GUG) Neighboring gene glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEAD-box helicase Dbp80

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035046485.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AalbF5 Primary Assembly

Genomic

  1. NC_085136.1 Reference AalbF5 Primary Assembly

    Range
    232367590..232370395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019672423.3 → XP_019527968.2  DEAD-box helicase Dbp80

    UniProtKB/TrEMBL
    A0AAA9ZBF9
    Conserved Domains (2) summary
    cd18787
    Location:355 → 491
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cl28899
    Location:125 → 349
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  2. XM_029873915.2 → XP_029729775.1  DEAD-box helicase Dbp80

    UniProtKB/TrEMBL
    A0AAA9ZBF9
    Conserved Domains (2) summary
    cd18787
    Location:355 → 491
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cl28899
    Location:125 → 349
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
Nucleotide Protein Strain
Heading Accession and Version

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