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CLEC5A C-type lectin domain containing 5A [ Hipposideros armiger (great roundleaf bat) ]

Gene ID: 109395611, updated on 30-Mar-2024

Summary

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Gene symbol
CLEC5A
Gene description
C-type lectin domain containing 5A
Gene type
protein coding
RefSeq status
MODEL
Organism
Hipposideros armiger
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros
Orthologs
human mouse all
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Genomic context

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See CLEC5A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM189008v1 (GCF_001890085.1) Unplaced Scaffold NW_017731828.1 (1160207..1170611, complement)

NW_017731828.1Genomic Context describing neighboring genes Neighboring gene probable inactive serine protease 58 Neighboring gene taste 2 receptor member 5 Neighboring gene serine protease 37 Neighboring gene maltase-glucoamylase Neighboring gene taste 2 receptor member 38 Neighboring gene maltase-glucoamylase 2 (putative)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017731828.1 Unplaced Scaffold Reference ASM189008v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables virus receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 5 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hipposideros armiger Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM189008v1 Primary Assembly

Genomic

  1. NW_017731828.1 Reference ASM189008v1 Primary Assembly

    Range
    1160207..1170611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019666791.1 → XP_019522336.1  C-type lectin domain family 5 member A isoform X2

    UniProtKB/TrEMBL
    A0A8B7T9G5

  2. XM_019666790.1 → XP_019522335.1  C-type lectin domain family 5 member A isoform X1

    UniProtKB/TrEMBL
    A0A8B7TCA0
Nucleotide Protein
Heading Accession and Version

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