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SDC3 syndecan 3 [ Hipposideros armiger (great roundleaf bat) ]

Gene ID: 109392070, updated on 30-Mar-2024

Summary

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Gene symbol
SDC3
Gene description
syndecan 3
See related
EnsemblRapid:ENSHARG00000002467
Gene type
protein coding
RefSeq status
MODEL
Organism
Hipposideros armiger
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros
Orthologs
human mouse all
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Genomic context

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See SDC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM189008v1 (GCF_001890085.1) Unplaced Scaffold NW_017731360.1 (7486945..7495589)

NW_017731360.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109392028 Neighboring gene pumilio RNA binding family member 1 Neighboring gene lysosomal protein transmembrane 5 Neighboring gene matrilin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017731360.1 Unplaced Scaffold Reference ASM189008v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syndecan-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hipposideros armiger Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM189008v1 Primary Assembly

Genomic

  1. NW_017731360.1 Reference ASM189008v1 Primary Assembly

    Range
    7486945..7495589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019660176.1 → XP_019515721.1  syndecan-3

    UniProtKB/TrEMBL
    A0A8B7SQN4
    Related
    ENSHARP00000004013.1, ENSHART00000004651.1
Nucleotide Protein
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Gene LinkOut

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