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CHST9 carbohydrate sulfotransferase 9 [ Hipposideros armiger (great roundleaf bat) ]

Gene ID: 109389210, updated on 30-Mar-2024

Summary

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Gene symbol
CHST9
Gene description
carbohydrate sulfotransferase 9
See related
EnsemblRapid:ENSHARG00000014219
Gene type
protein coding
RefSeq status
MODEL
Organism
Hipposideros armiger
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros
Orthologs
human mouse all
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Genomic context

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See CHST9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM189008v1 (GCF_001890085.1) Unplaced Scaffold NW_017731575.1 (1802514..2047136)

NW_017731575.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene uncharacterized LOC109389212 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1-like Neighboring gene aquaporin 4 Neighboring gene 60S ribosomal protein L36a-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017731575.1 Unplaced Scaffold Reference ASM189008v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hipposideros armiger Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM189008v1 Primary Assembly

Genomic

  1. NW_017731575.1 Reference ASM189008v1 Primary Assembly

    Range
    1802514..2047136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019654558.1 → XP_019510103.1  carbohydrate sulfotransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A8B7SBX3
    Related
    ENSHARP00000024294.1, ENSHART00000027284.1

  2. XM_019654557.1 → XP_019510102.1  carbohydrate sulfotransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8B7S9W4
    Related
    ENSHARP00000024285.1, ENSHART00000027274.1

  3. XM_019654562.1 → XP_019510107.1  carbohydrate sulfotransferase 9 isoform X3

    UniProtKB/TrEMBL
    A0A8B7SE22

  4. XM_019654561.1 → XP_019510106.1  carbohydrate sulfotransferase 9 isoform X3

    UniProtKB/TrEMBL
    A0A8B7SE22

  5. XM_019654560.1 → XP_019510105.1  carbohydrate sulfotransferase 9 isoform X3

    UniProtKB/TrEMBL
    A0A8B7SE22
Nucleotide Protein
Heading Accession and Version

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