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VCAN versican [ Hipposideros armiger (great roundleaf bat) ]

Gene ID: 109388134, updated on 30-Mar-2024

Summary

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Gene symbol
VCAN
Gene description
versican
Gene type
protein coding
RefSeq status
MODEL
Organism
Hipposideros armiger
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros
Orthologs
human mouse all
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Genomic context

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See VCAN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM189008v1 (GCF_001890085.1) Unplaced Scaffold NW_017731532.1 (2355512..2468712)

NW_017731532.1Genomic Context describing neighboring genes Neighboring gene X-ray repair cross complementing 4 Neighboring gene uncharacterized LOC109388126 Neighboring gene hyaluronan and proteoglycan link protein 1 Neighboring gene EGF like repeats and discoidin domains 3 Neighboring gene 40S ribosomal protein S25 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017731532.1 Unplaced Scaffold Reference ASM189008v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
versican core protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hipposideros armiger Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM189008v1 Primary Assembly

Genomic

  1. NW_017731532.1 Reference ASM189008v1 Primary Assembly

    Range
    2355512..2468712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019652586.1 → XP_019508131.1  versican core protein

    UniProtKB/TrEMBL
    A0A8B7S497
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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