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ALKBH8 alkB homolog 8, tRNA methyltransferase [ Hipposideros armiger (great roundleaf bat) ]

Gene ID: 109371436, updated on 30-Mar-2024

Summary

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Gene symbol
ALKBH8
Gene description
alkB homolog 8, tRNA methyltransferase
See related
EnsemblRapid:ENSHARG00000014215
Gene type
protein coding
RefSeq status
MODEL
Organism
Hipposideros armiger
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros
Orthologs
human mouse all
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Genomic context

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See ALKBH8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM189008v1 (GCF_001890085.1) Unplaced Scaffold NW_017731920.1 (803596..850836, complement)

NW_017731920.1Genomic Context describing neighboring genes Neighboring gene CWF19 like cell cycle control factor 2 Neighboring gene 60S acidic ribosomal protein P0 pseudogene Neighboring gene succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial pseudogene Neighboring gene methyltransferase-like protein 5 pseudogene Neighboring gene ELMO domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017731920.1 Unplaced Scaffold Reference ASM189008v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-oxoglutarate-dependent dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein alkB homolog 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hipposideros armiger Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM189008v1 Primary Assembly

Genomic

  1. NW_017731920.1 Reference ASM189008v1 Primary Assembly

    Range
    803596..850836 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019623949.1 → XP_019479494.1  alkylated DNA repair protein alkB homolog 8 isoform X2

    UniProtKB/TrEMBL
    A0A8B7PSU6

  2. XM_019623948.1 → XP_019479493.1  alkylated DNA repair protein alkB homolog 8 isoform X1

    UniProtKB/TrEMBL
    A0A8B7PW65
    Related
    ENSHARP00000024289.1, ENSHART00000027279.1
Nucleotide Protein
Heading Accession and Version

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