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LOC109363307 sulfoquinovosyl transferase SQD2-like [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109363307, updated on 1-Feb-2024

Summary

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Gene symbol
LOC109363307
Gene description
sulfoquinovosyl transferase SQD2-like
Locus tag
TanjilG_29015
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Genomic context

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See LOC109363307 in Genome Data Viewer
Location:
chromosome: LG01
Exon count:
10
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG01 NC_032009.1 (35374344..35378735, complement)

Chromosome LG01 - NC_032009.1Genomic Context describing neighboring genes Neighboring gene UPF0503 protein At3g09070, chloroplastic-like Neighboring gene protein NRT1/ PTR FAMILY 8.1-like Neighboring gene putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Neighboring gene symplekin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032009.1 Chromosome LG01 Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NC_032009.1 Reference LupAngTanjil_v1.0

    Range
    35374344..35378735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019609531.1 → XP_019465076.1  sulfoquinovosyl transferase SQD2-like isoform X1

    UniProtKB/TrEMBL
    A0A4P1RSP6

  2. XM_019609540.1 → XP_019465085.1  sulfoquinovosyl transferase SQD2-like isoform X2

    UniProtKB/TrEMBL
    A0A4P1RSP6
Nucleotide Protein
Heading Accession and Version

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