U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109354742 UDP-arabinopyranose mutase 2-like [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109354742, updated on 1-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
LOC109354742
Gene description
UDP-arabinopyranose mutase 2-like
Locus tag
TanjilG_29964
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109354742 in Genome Data Viewer
Location:
chromosome: LG08
Exon count:
4
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG08 NC_032016.1 (11089949..11092367)

Chromosome LG08 - NC_032016.1Genomic Context describing neighboring genes Neighboring gene developmental protein SEPALLATA 1-like Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene COBRA-like protein 4 Neighboring gene protein COBRA-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_032016.1 Chromosome LG08 Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-arabinopyranose mutase 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NC_032016.1 Reference LupAngTanjil_v1.0

    Range
    11089949..11092367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019597440.1 → XP_019452985.1  UDP-arabinopyranose mutase 2-like

    UniProtKB/TrEMBL
    A0A1J7H0Z2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases