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LOC109352936 probable pectate lyase 4 [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109352936, updated on 1-Feb-2024

Summary

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Gene symbol
LOC109352936
Gene description
probable pectate lyase 4
Locus tag
TanjilG_11897
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Genomic context

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See LOC109352936 in Genome Data Viewer
Location:
chromosome: LG07
Exon count:
4
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG07 NC_032015.1 (12193614..12195465, complement)

Chromosome LG07 - NC_032015.1Genomic Context describing neighboring genes Neighboring gene oxysterol-binding protein-related protein 4B-like Neighboring gene probable pectate lyase 4 Neighboring gene uncharacterized LOC109352938 Neighboring gene uncharacterized LOC109352939

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032015.1 Chromosome LG07 Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable pectate lyase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NC_032015.1 Reference LupAngTanjil_v1.0

    Range
    12193614..12195465 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019595122.1 → XP_019450667.1  probable pectate lyase 4

    UniProtKB/TrEMBL
    A0A1J7HMT9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases