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LOC109347639 probable galacturonosyltransferase 10 [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109347639, updated on 1-Feb-2024

Summary

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Gene symbol
LOC109347639
Gene description
probable galacturonosyltransferase 10
Locus tag
TanjilG_15320
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Genomic context

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See LOC109347639 in Genome Data Viewer
Location:
chromosome: LG05
Exon count:
2
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG05 NC_032013.1 (8646183..8651217)

Chromosome LG05 - NC_032013.1Genomic Context describing neighboring genes Neighboring gene cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like Neighboring gene uncharacterized LOC109346962 Neighboring gene myosin-11-like Neighboring gene photosystem II repair protein PSB27-H1, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032013.1 Chromosome LG05 Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NC_032013.1 Reference LupAngTanjil_v1.0

    Range
    8646183..8651217
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019587584.1 → XP_019443129.1  probable galacturonosyltransferase 10

    UniProtKB/TrEMBL
    A0A1J7HH10
Nucleotide Protein
Heading Accession and Version

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