U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109341407 probable arabinosyltransferase ARAD1 [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109341407, updated on 1-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
LOC109341407
Gene description
probable arabinosyltransferase ARAD1
Locus tag
TanjilG_23289
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109341407 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) Unplaced Scaffold NW_017727847.1 (41535..48390, complement)

NW_017727847.1Genomic Context describing neighboring genes Neighboring gene sulfiredoxin, chloroplastic/mitochondrial Neighboring gene 14 kDa zinc-binding protein Neighboring gene uncharacterized LOC109341409 Neighboring gene uncharacterized mitochondrial protein AtMg00810-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_017727847.1 Unplaced Scaffold Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable arabinosyltransferase ARAD1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NW_017727847.1 Reference LupAngTanjil_v1.0

    Range
    41535..48390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019579306.1 → XP_019434851.1  probable arabinosyltransferase ARAD1 isoform X2

  2. XM_019579305.1 → XP_019434850.1  probable arabinosyltransferase ARAD1 isoform X1

  3. XM_019579307.1 → XP_019434852.1  probable arabinosyltransferase ARAD1 isoform X3

    UniProtKB/TrEMBL
    A0A1J7G194

RNA

  1. XR_002106956.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases